diff --git a/aegisub/build/aegisub_vs2008/aegisub_vs2008.vcproj b/aegisub/build/aegisub_vs2008/aegisub_vs2008.vcproj
index 43f7a8540..1d079b499 100644
--- a/aegisub/build/aegisub_vs2008/aegisub_vs2008.vcproj
+++ b/aegisub/build/aegisub_vs2008/aegisub_vs2008.vcproj
@@ -1271,10 +1271,6 @@
 				RelativePath="..\..\src\plugin_manager.h"
 				>
 			</File>
-			<File
-				RelativePath="..\..\src\setup.cpp"
-				>
-			</File>
 			<File
 				RelativePath="..\..\src\subs_edit_box.cpp"
 				>
diff --git a/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj b/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj
index 88e512651..99392224b 100644
--- a/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj
+++ b/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj
@@ -350,7 +350,6 @@
     <ClCompile Include="$(SrcDir)preferences.cpp" />
     <ClCompile Include="$(SrcDir)preferences_base.cpp" />
     <ClCompile Include="$(SrcDir)scintilla_text_ctrl.cpp" />
-    <ClCompile Include="$(SrcDir)setup.cpp" />
     <ClCompile Include="$(SrcDir)spellchecker.cpp" />
     <ClCompile Include="$(SrcDir)spellchecker_hunspell.cpp" />
     <ClCompile Include="$(SrcDir)spline.cpp" />
diff --git a/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj.filters b/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj.filters
index 67fe6853b..fe37aa465 100644
--- a/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj.filters
+++ b/aegisub/build/msbuild/Aegisub/Aegisub.vcxproj.filters
@@ -1016,9 +1016,6 @@
     <ClCompile Include="$(SrcDir)string_codec.cpp">
       <Filter>Utilities</Filter>
     </ClCompile>
-    <ClCompile Include="$(SrcDir)setup.cpp">
-      <Filter>Config</Filter>
-    </ClCompile>
     <ClCompile Include="$(SrcDir)frame_main.cpp">
       <Filter>Main UI</Filter>
     </ClCompile>
diff --git a/aegisub/src/config/config_windows0.h b/aegisub/src/config/config_windows0.h
index 78d4a12fc..cd6303265 100644
--- a/aegisub/src/config/config_windows0.h
+++ b/aegisub/src/config/config_windows0.h
@@ -34,47 +34,57 @@
 /// @ingroup build
 ///
 
-
 #pragma once
 
-
 // Build credit: Set this to a string with your name as you want it to appear on the program
 #ifndef BUILD_CREDIT
 #define BUILD_CREDIT "Anonymous"
 #endif
 
-
 // Endianness: We don't support any Windows version that runs on big endian
 #define HAVE_LITTLE_ENDIAN
 #undef HAVE_BIG_ENDIAN
 
-
 ////////////// HIGH PRIORITY /////////////
 
 // Enable Automation 4 Lua
 // Requires: Lua 5.1 (in repository)
 #define WITH_AUTO4_LUA
 
-
 // Enable DirectSound audio player
 // Requires: DirectX SDK
 #define WITH_DIRECTSOUND
-
+#ifdef WITH_DIRECTSOUND
+#pragma comment(lib, "dsound.lib")
+#pragma comment(lib, "dxguid.lib")
+#endif
 
 // Enable Avisynth
-// Requires: nothing (just the avisynth dlls)
+// Requires: nothing (just the avisynth dlls at runtime)
 #define WITH_AVISYNTH
 
 
-// Enable ffmpegsource video and audio providers
-// Requires: FFmpegSource2 headers (in repository), loader library and DLL
+// Enable FFMS2 video and audio providers
+// Requires: FFMS2 SDK
 //#define WITH_FFMS2
-
-
-
+#ifdef WITH_FFMS2
+#pragma comment(lib, "ffms2.lib")
+#endif
 
 ///////////// MEDIUM PRIORITY ////////////
 
+// Enable FreeType2 font lister for the fonts collector
+// Make sure the version numbers are correct, as the library names change
+// Requires: FreeType2
+#define WITH_FREETYPE2
+#ifdef WITH_FREETYPE2
+#ifdef _DEBUG
+#pragma comment(lib, "freetype235_D.lib")
+#else
+#pragma comment(lib, "freetype235.lib")
+#endif
+
+
 // Enable FreeType2 font lister for the fonts collector
 // If you're on Visual Studio, also uncomment the library names and make sure they match the files that you have
 // Requires: FreeType2
@@ -104,7 +114,9 @@
 // tricky to get working on Windows, and has the additional problem of being GPL licensed.
 // Enable this option to use FFTW to get faster rendering of the audio spectrogram
 //#define WITH_FFTW3
-//#pragma comment(lib,libfftw.lib)
+#ifdef WITH_FFTW3
+#pragma comment(lib,libfftw.lib)
+#endif
 // Specify tags the update checker accepts
 // See <http://devel.aegisub.org/wiki/Technical/UpdateChecker> for details on tags.
 // Depending on who will be using your build, you may or may not want to have the
@@ -123,33 +135,36 @@
 // Enable FontConfig
 // Requires: fontconfig
 //#define WITH_FONTCONFIG
-
+#ifdef WITH_FONTCONFIG
+#pragma comment(lib,"libfontconfig.lib")
+#endif
 
 // Enable libass
 // Requires: libass
 //#define WITH_LIBASS
-
+#ifdef WITH_LIBASS
+#pragma comment(lib, "libass.lib")
+#endif
 
 // Enable PortAudio audio player
 // Requires PortAudio release 19
 //#define WITH_PORTAUDIO
-
+#ifdef WITH_PORTAUDIO
+#pragma comment(lib,"portaudio_x86.lib")
+#endif
 
 // Enable ALSA audio player
 // Requires Linux and libasound
 //#define WITH_ALSA
 
-
 // Enable OpenAL audio player
 // Requires OpenAL development libraries and headers
 //#define WITH_OPENAL
 
-
 // Enable Pulse Audio audio player
 // Requires libpulse (and a *NIX compatible system and a running sound server to actually use)
 //#define WITH_LIBPULSE
 
-
 // Display trace-level diagnostic messages during startup
 // Only enable for making special builds for end users having trouble with starting Aegisub
 //#define WITH_STARTUPLOG
diff --git a/aegisub/src/setup.cpp b/aegisub/src/setup.cpp
deleted file mode 100644
index 1a9285545..000000000
--- a/aegisub/src/setup.cpp
+++ /dev/null
@@ -1,81 +0,0 @@
-// Copyright (c) 2006, Rodrigo Braz Monteiro
-// All rights reserved.
-//
-// Redistribution and use in source and binary forms, with or without
-// modification, are permitted provided that the following conditions are met:
-//
-//   * Redistributions of source code must retain the above copyright notice,
-//     this list of conditions and the following disclaimer.
-//   * Redistributions in binary form must reproduce the above copyright notice,
-//     this list of conditions and the following disclaimer in the documentation
-//     and/or other materials provided with the distribution.
-//   * Neither the name of the Aegisub Group nor the names of its contributors
-//     may be used to endorse or promote products derived from this software
-//     without specific prior written permission.
-//
-// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
-// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
-// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
-// ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
-// LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
-// CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
-// SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
-// INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
-// CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
-// ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
-// POSSIBILITY OF SUCH DAMAGE.
-//
-// Aegisub Project http://www.aegisub.org/
-//
-// $Id$
-
-/// @file setup.cpp
-/// @brief Pragmas for automatically linking in required libraries during Windows build
-/// @ingroup main
-///
-
-#include "config.h"
-
-////////////////
-// FFMpegSource
-#ifdef WITH_FFMPEGSOURCE
-#pragma comment(lib, "ffms2.lib")
-#endif
-
-#ifdef WITH_PORTAUDIO
-#pragma comment(lib,"portaudio_x86.lib")
-#endif
-
-
-////////////////
-// Direct Sound
-#ifdef WITH_DIRECTSOUND
-#pragma comment(lib, "dsound.lib")
-#pragma comment(lib, "dxguid.lib")
-#endif
-
-
-/////////////
-// FreeType2
-#ifdef WITH_FREETYPE2
-#ifdef _DEBUG
-#ifdef FT2_LIB_DEBUG
-#pragma comment(lib,FT2_LIB_DEBUG)
-#endif
-#else
-#ifdef FT2_LIB_RELEASE
-#pragma comment(lib,FT2_LIB_RELEASE)
-#endif
-#endif
-#endif
-
-
-///////////////
-// Font Config
-#ifdef WITH_FONTCONFIG
-#pragma comment(lib,"libfontconfig.lib")
-#endif
-
-#ifdef WITH_LIBASS
-#pragma comment(lib, "libass.lib")
-#endif